Clarity MS-MS operation

Basic operating principles for the work on Clarity Instruments configured on use with MS-MS Extension are described in this chapter. Only topics related to MS-MS mode are discussed here, refer to the Clarity User Guide for detailed description of operations in standard mode.

The typical workflow for somebody working with routine analyses should consist of:

Preparation of the MS-MS Method

Setting MS Instrument

Opening the Demo_MS-MS project

Setting MS Search position

Creating MS Method

Editing MS Method

Defining Reference m/z values

Creating the MS-MS Calibration

Creating of the MS Calibration

Routine measurements

Routine measurements will work the same as in standard Clarity, performing the integration and identification of peaks automatically, connecting the calibration and showing the results. No significant changes of the workflow are expected compared to non-MS-MS chromatography.

Additionally, user of the Clarity MS Extension might want to perform other actions like Importing MS Chromatogram, Creating and filling your own library and Managing MS Library.